Dr Niklaas Buurma

Dr Niklaas Buurma

Lecturer in Physical Organic Chemistry

School of Chemistry

Email:
buurma@cardiff.ac.uk
Telephone:
+44 (0)29 2087 0301
Fax:
+44 (0)29 2087 4030

Dr Buurma's research is aimed at understanding reactions and interactions in aqueous solutions in order to control processes in water and is focused on two main areas.

The first area involves the development of conjugated DNA-binders with interesting optoelectronic properties for molecular diagnostics and therapeutic purposes as well as for use in self-assembled nanobioelectronic systems. Our contributions to this area include the synthesis of news DNA-binding compounds and subsequent studies of their DNA-binding properties as well as the development of data-analysis software for the analysis of isothermal titration calorimetry (ITC) data for complex coupled equilibria.

The second area of interest involves the study of organic reactions in aqueous solutions. We currently focus on studies of micellar medium effects, kinetic and mechanistic studies of surfactant-assisted metal-catalysed as well as nanoparticle-catalysed reactions. In addition, we study pharmaceutically relevant racemisation processes (in collaboration with AstraZeneca).

The ultimate aim of all our projects is to develop and use our ability to control and direct reactions and interactions in aqueous solution, bringing chemistry, (nano)engineering and nature together.

For more information, click on the 'Research' tab above.

Niek obtained his MSc (1997, cum laude) and PhD (2003, cum laude) under the supervision of Prof. Dr. Jan B. F. N. Engberts at the University of Groningen, the Netherlands. Niek was then a Postdoctoral Research Fellow at the University of Sheffield (2002-2006) with Prof C. A. Hunter and Dr. I. Haq. Niek was appointed Lecturer in Physical Organic Chemistry at Cardiff University in 2006.

Niek is a Member of the Royal Society of Chemistry, Fellow of the Higher Education Academy, Secretary of the RSC Physical Organic Chemistry Group, Member of the Core Team of the EPSRC Directed Assembly Network.

Unilever Research Prize 1998, Maître de Conférences invité at l’Université de Toulouse 3 - Paul Sabatier 2016.

CH3203 Organic Chemistry of Multiply bonded Systems

CH3303 Advanced Organic Chemistry

CH3312 Advanced organic chemistry

CH3405 Organic Chemistry 2

CHT206 Structure and mechanism in organic chemistry

CHT216 Colloquium

CHT232 Key skills for postgraduate chemists

CHT233 Advanced physical organic chemistry

CHT236 Practical physical organic chemistry

Details of each module is available in course finder

DNA is an important target for potential drugs and genosensors. Molecules allowing control over selectivity and affinity for DNA are therefore of particular interest as genosensors (and/or therapeutic agents). We develop new DNA-binding motifs consisting of fully conjugated systems which display changes in optoelectronic properties upon interaction with DNA. As an example of this approach, we have recently elucidated the binding mode and quantified the affinity of several cationically substituted oligothiophenes with DNA. Further work on additional conjugated oligoheteroaromatics is ongoing with the final aim to develop sequence-selective conjugated polymers for use as genosensors.

Apart from being an interesting target for biomedical applications, DNA in itself forms a versatile building block for a range of 3D structures. Combining these 3D structures with DNA-binding molecules having interesting electronic properties opens up the world of nanobioelectronics.

One of the techniques used for the study of interactions with DNA and other (bio)macromolecules is isothermal titration calorimetry (ITC). We have developed, and continue to develop, data analysis software for complex (coupled) equilibria. Our software allows the modular combination of interaction processes coupled with powerful post-fit parameter-validity analysis procedures, ensuring maximum flexibility in data analysis while keeping parameters statistically significant.

Our interest in organic reactivity focuses on aqueous solutions. A key interest is the use of micellar solutions. Micelles can be employed as colloidal catalysts (or catalyst supports) in aqueous solutions for a variety of reactions. In order to optimise the catalytic properties of micelles, we need to understand their properties as a reaction medium. We have developed a model that describes the local reaction medium provided by micelles. Based on our analysis, model solutions accurately mimicking the reaction medium as offered by micelles can be prepared. This in turn allows tuning of activity and selectivity of surfactant based catalysts.

We apply our understanding of the local reaction medium offered by micelles in the development of micelle-assisted transition metal-catalysed reactions. A representative system of current interest involves the oxidative coupling of boronic acids. Very recently, we have also ventured into approaches using nanoparticles.

In collaboration with AstraZeneca, we study the kinetics and mechanism of racemisation reactions in aqueous solutions. As part of this project, we develop the use of VCD for kinetic and mechanistic studies.

Finally, our studies of reactions and interactions require development of mathematical models for the analysis of experimental data. For example, in addition to our software for the analysis of complex ITC data, we have developed models for the global analysis of pH- and temperature-dependent enzyme kinetics and for the analysis of kinetic data for catalysis by gold nanoparticles encapsulated within a thermosensitive shell.